Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914336.1_cds_XP_016464341.1_57389
CDS Infomation

[gene=LOC107787309] [db_xref=GeneID:107787309] [protein=translation initiation factor IF-2-like] [protein_id=XP_016464341.1] [location=complement(join(5664..5798,5886..5963,8355..9635,9715..9867))] [gbkey=CDS]
Sequence

ATGGACCCATCCATGGATCTACCGACGACCACCGAACCACCGACGTTTAACTCAGCTCAA
CTTGTAAACCATGCTCCTACACCTACCCCTACCTCTCCTCAACCCCCTCCCCCTGCCCCT
TCCTTTTCGCCTACCCACCCGCCTTATGCTGAGATGATAACGGCGGCGATAACGGCGTTA
AAGGAGAGGGATGGGTCAAGCAGGATAGCCATAGCAAAGTATATAGACCGAGTCTACACA
AATCTTCCACCGAATCACTCGGCTTTGTTGACTCACCATCTTAAGCGTTTGAAGAACAGT
GGTTACCTTGCTATGGTCAAACACTCTTACATGCTCGCCGGACCACCTGGATCTGCTGCT
CCTCCTCCTCCCGCCGACGTCGATTCCAACGGTGTTGGTACTGATGTTTCTTCTCTTACT
AAAAGGAAACCTGGTCGTCCTCCTAAGCTCAAGCCCGAGGCCCAACCTCAAGTCCAAGCT
CAAGTCCAGTTTCAAGATCAACTTCAAGCCCAGCTTCAAGCCCAACTTCAAGCCCAACTT
CAAGCCCAACAGCAGCAAGCAGCCCAGTTTCAACCTCAATTCCAAACCCAGCCTCAATTC
ATCCAACAGCAGCCCCAGTACTTACCTCAACAACAGTTCCAACCCGACCCGTTACTCCAA
CCTCAGCAACAGTTCCAGACCCAGCCACAGACGCAGGCCTATGCTGCTACTGAAGCCCAA
AATTATGCGGGCCTTGGTGCCGAATCCGTGTTTGTTTCTCTGGGGCTAGCTGATGGGCCT
GTTGGAGTTCAGAATCCTGCTGTTGGGCTAGCTCCGGCACCGGGAGCGGAAGAGAGCACG
ACGAAGAAACGACCAGGTCGTCCCCGTAAGGATGGATCCACTGTAGTTAAACCGGTGGAA
CCCAAATTACCGGACCAGAGTGGTGGTACTAAGAGGAGACCTGGTCGTCCTCCTAAGAGT
ACGACAGTTGATGCTGCTCCTGGATCAGCTATGGGTACTGGACGACGAGGTCGGCCCAGG
AAAAATTCTGCTCCTGGACGACGAGGTCGGCCCAGGAAGAATGCGGCTGTTGCTGCTGCC
AATGGCGGTGCCAATGCCGCAAATTTTCCTTCTGTTGGTGCCAATGTGACAAATGTTCCA
GCTGGTGGTGTCCCGAGTGGAGCCATACCGACACCTAAACGACGGGGACGGCCACCAAGG
TCTAGTGGACCCCCTACTGCTACTGTGGGTGTTACAGATGTGCCTATTGCTGCTGCTTTT
GAAACCGAAAACTTGCCTACTGCTGTTAGTGGTGGCGTCACAAATAATGGGGCTATGCCT
CCCCTCGGAAAGCGACGTGGACGGCCTCCAAAATCTTACAGCGCTACAGCCGCTGCTCCT
ACTGCTAAGAGACCCAGGAAGCTTTCTGGAAAACCTCTGGGTCGACCTAGAAAGAATGTG
ACATCCCCTGCAGTTTCGGACCCCAAGTTGATGGTGGCCTATGAAGAACTAAAGGGCAAA
CTTGAACACATGCAATCAAGAATCAAGGAAGCAGCGAACGCACTGAAGCCATGCTTAAAT
GCTGAATCGCCAGCAATTGCTCTGGCAGCATTGCAAGAGTTAGAAGAGTTAGCAGCAGCA
GGGGGGGATCCAGTGCAGCAAAATTGA

Peptide Sequence

PEP ID

XP_016464341.1
PEP Infomation

PREDICTED: translation initiation factor IF-2-like [Nicotiana tabacum]
Sequence

MDPSMDLPTTTEPPTFNSAQLVNHAPTPTPTSPQPPPPAPSFSPTHPPYAEMITAAITAL
KERDGSSRIAIAKYIDRVYTNLPPNHSALLTHHLKRLKNSGYLAMVKHSYMLAGPPGSAA
PPPPADVDSNGVGTDVSSLTKRKPGRPPKLKPEAQPQVQAQVQFQDQLQAQLQAQLQAQL
QAQQQQAAQFQPQFQTQPQFIQQQPQYLPQQQFQPDPLLQPQQQFQTQPQTQAYAATEAQ
NYAGLGAESVFVSLGLADGPVGVQNPAVGLAPAPGAEESTTKKRPGRPRKDGSTVVKPVE
PKLPDQSGGTKRRPGRPPKSTTVDAAPGSAMGTGRRGRPRKNSAPGRRGRPRKNAAVAAA
NGGANAANFPSVGANVTNVPAGGVPSGAIPTPKRRGRPPRSSGPPTATVGVTDVPIAAAF
ETENLPTAVSGGVTNNGAMPPLGKRRGRPPKSYSATAAAPTAKRPRKLSGKPLGRPRKNV
TSPAVSDPKLMVAYEELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELAAA
GGDPVQQN

Transcript Sequence

Gene sequence data has not been registered.